@> 7125 atoms and 1 coordinate set(s) were parsed in 0.25s.
@> 6923 atoms and 1 coordinate set(s) were parsed in 0.24s.
Visualizations and resultsΒΆ
Original Structure VisualizationΒΆ
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@> 7125 atoms and 1 coordinate set(s) were parsed in 0.24s.
@> 6923 atoms and 1 coordinate set(s) were parsed in 0.24s.
1h38D_TEMP
Blue:1qlnA Red:1h38D
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AlphaFold predictionsΒΆ
Best AF prediction to fold 1ΒΆ
@> 6802 atoms and 1 coordinate set(s) were parsed in 0.23s.
@> 7125 atoms and 1 coordinate set(s) were parsed in 0.24s.
Blue:ShallowMsa_010_unrelaxed_rank_002_alphafold2_ptm_model_3_seed_000 Red:1qlnA
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Best AF prediction to fold 2ΒΆ
@> 6802 atoms and 1 coordinate set(s) were parsed in 0.24s.
@> 6923 atoms and 1 coordinate set(s) were parsed in 0.32s.
@> 6802 atoms and 1 coordinate set(s) were parsed in 0.24s.
@> 6923 atoms and 1 coordinate set(s) were parsed in 0.25s.
1h38D_TEMP
Blue:ShallowMsa_007_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 Red:1h38D
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EsmFold PredictionΒΆ
Best EsmFold prediction to fold 1ΒΆ
@> 7125 atoms and 1 coordinate set(s) were parsed in 0.36s.
@> 6860 atoms and 1 coordinate set(s) were parsed in 0.26s.
reference and target coordinate arrays must have same number of atoms
@> 7125 atoms and 1 coordinate set(s) were parsed in 0.29s.
@> 6860 atoms and 1 coordinate set(s) were parsed in 0.27s.
ShallowMsa_010_2_TEMP
Blue:1qlnA Red:ShallowMsa_010_2
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Best EsmFold prediction to fold 2ΒΆ
@> 6923 atoms and 1 coordinate set(s) were parsed in 0.25s.
@> 6745 atoms and 1 coordinate set(s) were parsed in 0.24s.
Blue:1h38D Red:1h38D_esm
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Contact maps Msa TransformersΒΆ
No columns to parse from file
No max_f1Score_pdb1 No max_f1Score_pdb2 No max_precision_pdb1 No max_precision_pdb2 No max_recall_pdb1 No max_recall_pdb2
No max_f1Score_pdb1 No max_f1Score_pdb2 No cmap_pred_precision_1 No cmap_pred_precision_2 No cmap_pred_recall_1 No cmap_pred_recall_2
No plot for f1Score_1 No plot for f1Score_2
No precision_1 No precision_2
No recall_1 No recall_2